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脚踏石模型stepping-stone model

已有 9934 次阅读 2017-2-19 22:41 |个人分类:翻译作品|系统分类:科研笔记| Model, 遗传学, 种群, 脚踏石模型, stepping-stone

脚踏石模型stepping-stone model

#作者信息

熊荣川

明湖实验室

xiongrongchuan@126.com

http://blog.sciencenet.cn/u/Bearjazz


理论出处

In natural populations, individuals often  are distributed more or less discontinuously to form numerous colonies, and  individuals may be exchanged between adjacent or nearby colonies. To analyze  such a situation, one of us proposed a model which he termed “stepping stone  model” of population structure (KIMUR 1953)  

在自然种群中,个体往往分布不连续,从而形成或多或少的聚居点,相邻或邻近的聚居点之间有一定的个体交流。为了分析这种情况,我们提出了一个模型,称这种种群结构为“脚踏石模型”(KIMUR 1953)

ONE DIMENSIONAL CASE

Let US consider an infinite array of  colonies with their position represented by integers on a line (Figure 1).  The simplest situation for this one dimensional stepping stone model is that  in each generation an individual can migrate at most one step” in either  direction between colonies. In other words, exchange of individuals is  restricted to be between adjacent colonies.

一维脚踏石模型

让我们考虑一个有无限多个聚居点的阵列,他们的位置用线上的整数表示(图1)。这个一维的脚踏石模型的最简单的情况是,在聚居点之间,每一代个体最多可以在两个方向上迁移一步。换言之,个体交流被限制在相邻的聚居点之间。


Kimura, M. (1953). "Stepping Stone" model of  population. Rep. Nat. Inst. Genetics Japan. 3: 62-63.

Kimura, M. and G. H. Weiss (1964). "The Stepping  Stone Model of Population Structure and the Decrease of Genetic Correlation  with Distance." Genetics49(4): 561-576.





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