这里有篇文章报道了相关内容 Prioritization of candidate genes in QTL regions based on associations between traits and biological processes http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4274756/pdf/12870_2014_Article_330.pdf 我也是刚看到文章,没测试过,有兴趣的朋友可以试下。当然如果根据这篇文章的 ...
我的和彩云笔记,提供了这样一个例子,笔记的最后提供了全文(http://mnote.weibo.10086.cn/share/sharenote.html?id=c1e0f16c76b9abeb05f2713b1eb53e04).文章为: http://www.plantcell.org/content/early/2014/08/12/tpc.114.128512.abstract eQTL Mapping of Transposon Silencing Reveals a ...
Development of a next-generation NIL library in Arabidopsis thaliana for dissecting complex traits( http://www.biomedcentral.com/1471-2164/14/655 ) 这篇文章利用RIL来建立NIL,但还要通过一次回交。为什么不直接用基于残余杂合系的NIL呢
1 Linkage analysis and QTL mapping using SNP dosage data in a tetraploid potato mapping population( http://www.ncbi.nlm.nih.gov/pubmed/23704960 ) 2 PLoS One. 2013;8(3):e57438. doi: 10.1371/journal.pone.0057438. Epub 2013 Mar 4. Genome wide allele frequency fingerprints (GWAFFs) of populations vi ...
1: Li J, Zhang W, Wu H, Guo T, Liu X, Wan X, Jin J, Hanh TT, Thoa NT, Chen M, Liu S, Chen L, Liu X, Wang J, Zhai H, Wan J. Fine mapping of stable QTLs related to eating quality in rice (Oryza sativa L.) by CSSLs harboring small target chromosomal segments. Breed Sci. 2011 Dec;61(4):338-46. doi: 1 ...
A bioinformatic and transcriptomic approach to identifying positional candidate genes without fine mapping: an example using rice root-growth QTLs. http://www.ncbi.nlm.nih.gov/pubmed/18755262 这个有点扯,但这是一种新的尝试.如果是高密度基因型数据,再结合这个,也许会靠谱点
http://www.ncbi.nlm.nih.gov/pubmed/21390234 Gains in QTL detection using an ultra-high density SNP map based on population sequencing relative to traditional RFLP/SSR markers. 用同样的群体,比较了不同密度的标记建立的遗传图谱在进行QTL作图时的效果.这是篇非常值得珍藏和学习的文章(呵呵,不过我现在只看 ...
QTL Analysis of High Thermotolerance with Superior and Downgraded Parental Yeast Strains Reveals New Minor QTLs and Converges on Novel Causative Alleles Involved in RNA Processing( http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1003693 )
突然看到这篇文章。对重测序的RIL来进行QTL定位比较感兴趣。作个记号 Plant Cell Rep. 2013 Jan;32(1):103-16. doi: 10.1007/s00299-012-1345-6. Epub 2012 Oct 12. Identification of QTLs associated with tissue culture response through sequencing-based genotyping of RILs derived from 93-11 × Nipponbare in ...