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第一作者:Mélanie Massonnet
第一单位:美国加州大学戴维斯分校
通讯作者:Dario Cantu
Abstract
背景回顾:It remains a major challenge to identify the genes and mutations that lead to plant sexual differentiation.
主要研究:Here, we study the structure and evolution of the sex-determining region (SDR) in Vitis species.
组装:We report an improved, chromosome-scale Cabernet Sauvignon genome sequence and the phased assembly of nine wild and cultivated grape genomes. 鉴定SDR:By resolving twenty Vitis SDR haplotypes, we compare male, female, and hermaphrodite haplotype structures and identify sex-linked regions. 鉴定性别决定基因:Coupled with gene expression data, we identify a candidate male-sterility mutation in the VviINP1 gene and potential female-sterility function associated with the transcription factor VviYABBY3. 推测:Our data suggest that dioecy has been lost during domestication through a rare recombination event between male and female haplotypes. 结论展望:This work significantly advances the understanding of the genetic basis of sex determination in Vitis and provides the information necessary to rapidly identify sex types in grape breeding programs.
摘 要
目前,鉴定作用于植物性别分化的基因以及突变仍然是一个艰巨的挑战。本文中,作者研究了葡萄中的性别决定区域SDR的结构和演化。首先,作者报道了一个改良升级版Cabernet Sauvignon葡萄品种的染色体级别基因组组装,并获得了9个野生型和栽培种葡萄基因组的分型组装结果。通过20个葡萄的SDR单倍型,作者比较了雄性、雌性以及雌雄共同单倍型的结构,鉴定了性别连锁的区域。结合基因表达数据,作者进一步鉴定到了在VviINP1基因上存在一个雄性育性突变,另外还有一个与雌性育性功能相关的潜在基因VviYABBY3转录因子。本文的数据显示在葡萄的驯化过程中,雄性与雌性单倍型之间发生过一次罕见的重组事件,该事件导致了雌雄异株的丢失。本文的工作增加了对于葡萄性别决定的遗传基础理解,同时也为葡萄育种项目提供了快速鉴定性别类型所必需的信息。
通讯作者
**Dario Cantu**
个人简介:
2009年,加州大学戴维斯分校,博士。 研究方向: 葡萄对于生物和非生物胁迫的响应以及风味的遗传基础。
doi: 10.1038/s41467-020-16700-z
Journal: Nature Communications
Published date: June 09, 2020
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