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独立成分分析(ICA)

已有 16346 次阅读 2010-12-9 10:55 |个人分类:未分类|系统分类:科研笔记

ICA与PCA的区别在于:ICA要求找到最大独立的方向,各个成分是独立的;PCA要求找到最大方差的方向,各个成分是正交的。

 常用的ICA算法有一下几种,如图中所示:


常用的ICA工具包如下图所示:

 

X=AS ,u=WX

Infomax(Information Maximum)介绍

• Proposed by Linsker in 1992
• Popularized by Bell & Sejnowski in 1995
• First applied to fMRI data in 1998
• Promising performance on a number of BSS

Properties
• Intuitively meaningful contrast function (mutual information)
• Typically provides a simple learning rule
• Choice of nonlinearity is required
• Used on majority of fMRI applications

x = input, y = g(w, x) = output, u=wx

Infomax算法中存在一个学习率,使得W不断更新,最后输入x和输出y之间的互信息最大。

Negentropy/Kurtosis
• Assumes non-Gaussian sources
• Motivated by central limit theorem, the mixtures will be (more) Gaussian
• The independent components are calculated by maximizing the KL divergence between the output
pdfs and a Gaussian pdf.
• Negentropy is always non-negative and is zero only if the variable is Gaussian.
 

GroupICA介绍:

Group ICA can be broken up into 6 stages.
Preprocessing
Same Preprocessing that you normally do in SPM. Realignment, motion correction, co-registration, etc.
• Data Reduction
 Implemented using PCA.
ICA Separation
Implemented using any ICA algorithm( Infomax, Optimal ICA, FastICA).
Back Reconstruction
Individual Subject Components are back reconstructed using the results from PCA.
Component calibration

including 1) scaling and 2) sign change Using the functional data the components, time courses and spatial maps, are converted from arbitrary units to percent signal change.
Group Statistics
Using the subject's back reconstructed components statistics are calculated.

GroupICA公式解析如下:

  For Subject i(the first reduction)

(L×V=L×K K×V )

V: the number of voxels;

K: the number of fMRI time points;

L: the time dimension after first reduction

 For M subjects:X is the group fMRI data after second reduction (N×V)



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