job id # 1678 started Mon Jul 9 21:52:31 2012
Max_citations: 50000
Stoplist: /var/www/arrowsmith_uic/data/stopwords_pubmed
Ngram_max: 3
A_query_raw: matrix metalloproteinase 13Mon Jul 9 21:52:39 2012
A query = matrix metalloproteinase 13 started Mon Jul 9 21:52:47 2012
A query resulted in 1578 titles
C_query_raw: matrix metalloproteinase 13 Mon Jul 9 21:53:14 2012
C: matrix metalloproteinase 13 1578
A: pubmed_query_A 1578
AC: ( matrix metalloproteinase 13 ) AND ( matrix metalloproteinase 13 ) 1578
C_query_raw: articular chondrocytes and osteoarthritis Mon Jul 9 21:54:00 2012
C: articular chondrocytes and osteoarthritis 2398
A: pubmed_query_A 1578
AC: ( matrix metalloproteinase 13 ) AND ( articular chondrocytes and osteoarthritis ) 172
C_query_raw: articular chondrocytes and osteoarthritis Mon Jul 9 21:54:31 2012
C: articular chondrocytes and osteoarthritis 2398
A: pubmed_query_A 1578
AC: ( matrix metalloproteinase 13 ) AND ( articular chondrocytes and osteoarthritis ) 172
C query = articular chondrocytes and osteoarthritis started Mon Jul 9 21:54:47 2012
C query resulted in 2398 titles
A AND C query resulted in 172 titles
2873 B-terms ready on Mon Jul 9 21:56:35 2012
Sem_filter:
Genes & Molecular Sequences, and Gene & Protein Names
333 B-terms left after filter executed Mon Jul 9 21:59:52 2012
B-list on Mon Jul 9 22:00:51 2012
1 cox-2
2 jnk
3 akt
4 vegf
5 erk1
6 beta catenin
7 smad
8 aggrecan
9 toll receptor
10 wnt
11 synovial fibroblast
12 smad3
13 map kinase
14 mmp-2
15 timp-1
16 leptin
17 signal regulated kinase
18 tissue inhibitor metalloproteinase
19 oncostatin m
20 c jun
21 adiponectin
22 promoter polymorphism
23 fibromodulin
24 matrix metalloproteinase
25 adamts-4
26 timp
27 mmp-9
28 cdna
29 jak stat
30 matrix gene
31 c fos
32 endostatin
33 p38
34 collagen induced arthritis
35 chemokine
36 nf kappab
37 cd44
38 bone morphogenetic protein
39 il-1beta
40 caspase-3
41 rankl
42 il-6
43 il-1
44 ap-1
45 promoter region
46 cathepsin k
47 gadd45beta
48 sox9
49 transcription factor
50 mmp-1
51 metalloproteinase gene
52 mmp-13
53 igf i
54 matrix metalloproteinase gene
55 rheumatoid synovial
56 leukemia inhibitory factor
57 erk
58 tgf beta1
59 caspase-8
60 ccn2
61 tgf beta
62 acl
63 human synovial
64 igf
65 interleukin
66 mmp-3
67 protein kinase c
68 jun
69 timp-2
70 bcl-2
71 pthrp
72 estrogen receptor
73 ctgf
74 endo180
75 fibroblast growth factor
76 bmp
77 mmp
78 disintegrin
79 collagen gene
80 tnf alpha
81 glucocorticoid receptor
82 hyaluronan synthase
83 mmp13
84 tlr4
85 cathepsin b
86 p53
87 bmp-2
88 hip
89 pth
90 proteoglycan
91 related oncogene alpha
92 metalloprotease
93 catabolic gene
94 estrogen receptor alpha