# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz An approximately unbiased (AU) test that uses a newly devised multiscale bootstrap technique was developed for general hypothesis testing of r ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz Likelihood-based statistical tests of competing evolutionary hypotheses (tree topologies) have been available for approximately a decade. By far the mo ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz The Shimodaira–Hasegawa test (SH; ), which is also based on a non-parametric bootstrap, was developed to compare multiple topologies. For this test, ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz Getting trees into R : Trees in R are usually stored in the S3 phylo class (implemented in ape ), though the S4 phylo4 class (implement ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz I was wondering if there is a tree statistic that compares the topology of two trees which gives and indication of the degree of similarity or diss ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz In context|systematics| the difference between ingroup and outgroup is that ingroup is (systematics) in cladistics, the monophyletic group that inc ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz Adaptive radiations such as the Darwin’s finches on the Galapagos archipelago, the Hawaiian silver swords, the Caribbean anoles lizards, and the cichlid fish of the Eas ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz The outgroup effect on tree topology is well established for sequence data, but has so far received no attention in connection with multilocus binary pre ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz Adaptive radiations such as the Darwin’s finches on the Galapagos archipelago, the Hawaiian silver swords, the Caribbean anoles lizards, and the cichlid fish o ...
#编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz For example: 10 terminal taxa there are 34,459,425 rooted bifurcating trees 15 taxa there are 213,458,046,676,875 rooted bifurcating trees 30 taxa there are 4 e78 trees. (4,000,000,000,000,000,00 ...