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分享 [转载]Protein pKa calculations
袁曙光 2010-7-23 00:00
From Wikipedia, the free encyclopedia Jump to: navigation , search In computational biology , protein pKa calculations are used to estimate the pKa values of amino acids as they exist within proteins . These calculations complement the ...
个人分类: 好文转载|4596 次阅读|没有评论
分享 [转载]AutoDock Vina
袁曙光 2010-7-15 01:10
AutoDock Vina We thank Mgr. Ji? Wiesner for writting following text. Description AutoDock Vina is a new program for drug discovery, molecular docking and virtual screening, offering partial receptor flexibility, multi-core capability, high performance and enhanced accuracy and eas ...
个人分类: Linux相关|7715 次阅读|没有评论
分享 MODELLER 9v8 user manual
袁曙光 2010-7-2 21:20
Andrej ˇSali with help from Ben Webb, M.S. Madhusudhan, Min-Yi Shen, Marc A. Mart?-Renom, Narayanan Eswar, Frank Alber, Maya Topf, Baldomero Oliva, Andr´as Fiser, Roberto S´anchez, Bozidar Yerkovich, Azat Badretdinov, Francisco Melo, John P. Overington, and Eric Feyfant email: modeller-c ...
个人分类: 科研笔记|4002 次阅读|没有评论
分享 [转载]shell 编程基础
袁曙光 2010-6-29 14:19
转帖注明出处。不吝惜知识,但吝惜劳动。 shell编程基础 查看当前支持的shell:cat /etc/shells 定义变量:变量名=变量值 查看变量值:echo $变量名 从键盘输入内容为变量赋值:read 变量名: :允许通过$符号引用其他变量值 :禁止引用其他变量值,$视为普通字符 ``:将命令执行的 ...
个人分类: Linux相关|3480 次阅读|没有评论
分享 One self rendered 3D figure
袁曙光 2010-6-28 12:55
个人分类: 科研笔记|2085 次阅读|2 个评论
分享 系统有备无患
袁曙光 2010-6-11 04:29
It is of great importance to backup our system so that it would be very helpful when it is cracked or reinstalled. The System Backup module in SUSE Linux YAST enable us to finish this task easily. click manually backup give some basic parameters and click Next.... Now Bac ...
个人分类: Linux相关|2336 次阅读|没有评论
分享 PDB FORMAT FAQ
袁曙光 2010-6-7 04:39
FROM www.pdb.org SEQUENCE, COORDINATE, AND SEQUENCE DATABASE ISSUES Q: What sequence is reported in PDB SEQRES records? A: All residues in the crystal or in solution, including residues not present in the model ( i.e. , disordered, lacking electron density, cloning arti ...
个人分类: 科研笔记|3425 次阅读|没有评论
分享 Protein-Protein Interaction:AlphaScreen Principle
袁曙光 2010-6-6 02:11
AlphaScreen SureFire ERK Assay Principle Detection of activated ERK is enabled by immuno-sandwich capture of endogenous phosphorylated ERK in cell lysates. Antibody-coated AlphaScreen beads generate a highly amplified signal when in close proximity due to binding of ...
个人分类: 科研笔记|8091 次阅读|没有评论
分享 Labplot---linux下的Origin(内附labplot manual)
袁曙光 2010-5-29 03:23
Recently, I am analyzing the MD results of Desmond and found that the plot tools embeded in Desmond itself is not so nice. So it is wise to plot the raw date by other independent plot tools. As we all know that Origin is a perfect data and plot analysis tools under Windows, while Labplot would be a ...
个人分类: Linux相关|9276 次阅读|1 个评论

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