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Plant Biotechnol J:玉米籽粒直链淀粉生物合成的遗传基础

已有 5083 次阅读 2017-9-18 08:51 |个人分类:每日摘要|系统分类:论文交流

The genetic architecture of amylose biosynthesis in maize kernel


First author:Changsheng Li; Affiliations: Shanghai Jiaotong University (上海交大): Shanghai, China

Corresponding author: Wenqin Wang (王文琴)


Starch (淀粉) is the most abundant storage carbohydrate (储存的碳水化合物) in maize kernel (玉米籽粒). The content of amylose (直链淀粉) and amylopectin (支链淀粉) confers unique properties in food processing (食品加工) and industrial application. Thus, the resurgent interest has been switched to the study of individual amylose or amylopectin rather than total starch, whereas the enzymatic machinery for amylose synthesis remains elusive. We took advantage of the phenotype of amylose content and the genotype of 9,007,194 single nucleotide polymorphisms from 464 inbred maize lines. The genome-wide association study identified 27 associated loci involving 39 candidate genes that were linked to amylose content including transcription factors, glycosyltransferases (糖基转移酶), glycosidases (糖苷酶), as well as hydrolases (水解酶). Except the waxy gene that encodes the granule-bound starch synthase (颗粒结合淀粉合成酶), the remaining candidate genes were located in the upstream pathway of amylose synthesis, while the downstream members were already known from prior studies. The linked candidate genes could be transferred to manipulate amylose content and thus add value to maize kernel in the breeding programme.


淀粉是玉米籽粒最主要的储存碳水化合物。直链淀粉和支链淀粉的含量直接影响着后期食品加工及工业应用的特性。因此,现在对于玉米的研究重点从总的淀粉含量逐步转为直链淀粉或支链淀粉,然而对于直链淀粉合成的酶学特性还所知甚少。本文结合了464个玉米自交系的直链淀粉含量表型和9,007,194个SNPs基因型进行分析。全基因组关联分析鉴定了27候选基因与直链淀粉含量相关,这些基因包括了转录因子、糖基转移酶、糖苷酶以及水解酶。除了编码颗粒结合淀粉合成酶的waxy基因,其余的候选基因均在直链淀粉生物合成的上游,而先前的研究亦已知道了下游的一些基因。这些坚定的关联基因可以作为后期改变直链淀粉含量的靶基因,在玉米的育种项目中增加玉米籽粒的价值。


通讯:王文琴 (http://www.agri.sjtu.edu.cn/Data/View/2301)


个人简介:1996-2000年,兰州大学,生物学学士;2000-2003年,中国疾病预防控制中心,免疫学研究生;2003-2007年,浙江湖州师范学院,讲师;2008-2013年,美国新泽西州立大学,植物学博士;2013-2015年,美国新泽西州立大学,植物学博士后;2015年起在上海交通大学任教,现为上海交通大学农业与生物学院副教授。


研究方向:植物基因组学与生物能源应用;植物基因组学与作物品质;生物信息学


doi: 10.1111/pbi.12821


Journal: Plant Biotechnology Journal
Published online: September 15, 2017.


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