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我搜集的水稻基因组序列,如果有新序列出来,请告诉我下
16个下面这篇文章提到的水稻基因组
2020 A platinum standard pan-genome resource that represents the population stru.pdf
包括这些品种:
Azucena_GJ-trop1
IR64_XI-1B1
IRGC_109232-1_XI-3B2
IRGC12485_cB
IRGC132424_XI-2A
IRGC19961_GJ-trop2
IRGC34749_cA2
IRGC52339_XI-2B
IRGC53418_XI-1B2
IRGC65972_XI-3B1
IRGC80273_GJ-subtrp
IRGC81487-1_XI-3A
mh63_2017_XI-adm(有两个基因组版本)
N22_v1
RAP_IRGSP-1.0_genome.fasta(最常用的水稻参考基因组)
zs97_2017(有两个基因版本)
15个其它水稻品种基因组:
A123_Japonica
Bio226_Indica
Carolina_Gold
HEG4_Japonica
Hitomebore_Japonica
HR12_Indica
IR8_Indica
kittake_japonica
Koshihikari_Japonica
Lperr_v1.4
R498
R600_indica-japonica
tetep
ZH11
9311(多个版本)
7个野生稻基因组:
O.barthii_v1.3
O.brachyantha_v1.4
O.glaberrima_v1
O.glumaepatula_v1.5
O.nivara_v1.0
O.punctata_v1.2
O.rufipogon_W1943
已经从GenBank获得全部序列,文件比较大,看我啥时候能全部上传到云盘上。
涉及的accession number(根据冒号右边的序列号,可以从GenBank获得相应的序列)
chromosome 1: CM025769.1
chromosome 2: CM025770.1
chromosome 3: CM025771.1
chromosome 5: CM025772.1
chromosome 6: CM025773.1
chromosome 7: CM025774.1
chromosome 8: CM025775.1
chromosome 9: CM025776.1
chromosome 10: CM025777.1
chromosome 11: CM025778.1
chromosome 12: CM025779.1 genome1
chromosome 1: CM020658.1
chromosome 2: CM020659.1
chromosome 3: CM020660.1
chromosome 4: CM020661.1
chromosome 5: CM020662.1
chromosome 6: CM020663.1
chromosome 7: CM020664.1
chromosome 8: CM020665.1
chromosome 9: CM020666.1
chromosome 10: CM020667.1
chromosome 11: CM020668.1
chromosome 12: CM020669.1 genome2
chromosome 3: CM025766.1
chromosome 7: CM025767.1
chromosome 12: CM025768.1
chromosome 1: CM012053.1 27
chromosome 2: CM012054.1
chromosome 3: CM012055.1
chromosome 4: CM012056.1
chromosome 5: CM012057.1
chromosome 6: CM012058.1
chromosome 7: CM012059.1
chromosome 8: CM012060.1
chromosome 9: CM012061.1
chromosome 10: CM012062.1
chromosome 11: CM012063.1
chromosome 12: CM012064.1 38 genome3
chromosome 1: CM020876.1 39
chromosome 2: CM020877.1
chromosome 3: CM020878.1
chromosome 4: CM020879.1
chromosome 5: CM020880.1
chromosome 6: CM020881.1
chromosome 7: CM020882.1
chromosome 8: CM020883.1
chromosome 9: CM020884.1
chromosome 10: CM020885.1
chromosome 11: CM020886.1
chromosome 12: CM020887.1 50 genome4
chromosome 1: CM020621.1 51
chromosome 2: CM020622.1
chromosome 3: CM020623.1
chromosome 4: CM020624.1
chromosome 5: CM020625.1
chromosome 6: CM020626.1
chromosome 7: CM020627.1
chromosome 8: CM020628.1
chromosome 9: CM020629.1
chromosome 10: CM020630.1
chromosome 11: CM020631.1
chromosome 12: CM020632.1 62 genome5
chromosome 1: CM012941.1
chromosome 2: CM012942.1
chromosome 3: CM012943.1
chromosome 4: CM012944.1
chromosome 5: CM012945.1
chromosome 6: CM012946.1
chromosome 7: CM012947.1
chromosome 8: CM012948.1
chromosome 9: CM012949.1
chromosome 10: CM012950.1
chromosome 11: CM012951.1
chromosome 12: CM012952.1 74 genome6
chromosome 1: CM014923.1
chromosome 2: CM014924.2
chromosome 3: CM014925.2
chromosome 4: CM014926.2
chromosome 5: CM014927.2
chromosome 6: CM014928.2
chromosome 7: CM014929.2
chromosome 8: CM014930.2
chromosome 9: CM014931.2
chromosome 10: CM014932.2
chromosome 11: CM014933.2
chromosome 12: CM014934.2 86 genome7
chromosome 1: CP018157.1
chromosome 2: CP018158.1
chromosome 3: CP018159.1
chromosome 4: CP018160.1
chromosome 5: CP018161.1
chromosome 6: CP018162.1
chromosome 7: CP018163.1
chromosome 8: CP018164.1
chromosome 9: CP018165.1
chromosome 10: CP018166.1
chromosome 11: CP018167.1
chromosome 12: CP018168.1 98 genome8
chromosome 1: CP012609.1
chromosome 2: CP012610.1
chromosome 3: CP012611.1
chromosome 4: CP012612.1
chromosome 5: CP012613.1
chromosome 6: CP012614.1
chromosome 7: CP012615.1
chromosome 8: CP012616.1
chromosome 9: CP012617.1
chromosome 10: CP012618.1
chromosome 11: CP012619.1
chromosome 12: CP012620.1 110 genome9
chromosome 1: CM020754.1
chromosome 2: CM020755.1
chromosome 3: CM020756.1
chromosome 4: CM020757.1
chromosome 5: CM020758.1
chromosome 6: CM020759.1
chromosome 7: CM020760.1
chromosome 8: CM020761.1
chromosome 9: CM020762.1
chromosome 10: CM020763.1
chromosome 11: CM020764.1
chromosome 12: CM020765.1 genome10 122
chromosome 1: CM020670.1
chromosome 2: CM020671.1
chromosome 3: CM020672.1
chromosome 4: CM020673.1
chromosome 5: CM020674.1
chromosome 6: CM020675.1
chromosome 7: CM020676.1
chromosome 8: CM020677.1
chromosome 9: CM020678.1
chromosome 10: CM020679.1
chromosome 11: CM020680.1
chromosome 12: CM020681.1 g11 134
chromosome 1: CM020646.1
chromosome 2: CM020647.1
chromosome 3: CM020648.1
chromosome 4: CM020649.1
chromosome 5: CM020650.1
chromosome 6: CM020651.1
chromosome 7: CM020652.1
chromosome 8: CM020653.1
chromosome 9: CM020654.1
chromosome 10: CM020655.1
chromosome 11: CM020656.1
chromosome 12: CM020657.1 g12 146
chromosome 1: CM003922.2
chromosome 2: CM003923.2
chromosome 3: CM003924.2
chromosome 4: CM003925.2
chromosome 5: CM003926.2
chromosome 6: CM003927.2
chromosome 7: CM003928.2
chromosome 8: CM003929.2
chromosome 9: CM003930.2
chromosome 10: CM003931.2
chromosome 11: CM003932.2
chromosome 12: CM003933.2 g13 158
chromosome 1: CM020682.1
chromosome 2: CM020683.1
chromosome 3: CM020684.1
chromosome 4: CM020685.1
chromosome 5: CM020686.1
chromosome 6: CM020687.1
chromosome 7: CM020688.1
chromosome 8: CM020689.1
chromosome 9: CM020690.1
chromosome 10: CM020691.1
chromosome 11: CM020692.1
chromosome 12: CM020693.1 g14 170
chromosome 1: CM003910.2
chromosome 2: CM003911.2
chromosome 3: CM003912.2
chromosome 4: CM003913.2
chromosome 5: CM003914.2
chromosome 6: CM003915.2
chromosome 7: CM003916.2
chromosome 8: CM003917.2
chromosome 9: CM003918.2
chromosome 10: CM003919.2
chromosome 11: CM003920.2
chromosome 12: CM003921.2 g15 182
chromosome 1: CM020718.1
chromosome 2: CM020719.1
chromosome 3: CM020720.1
chromosome 4: CM020721.1
chromosome 5: CM020722.1
chromosome 6: CM020723.1
chromosome 7: CM020724.1
chromosome 8: CM020725.1
chromosome 9: CM020726.1
chromosome 10: CM020727.1
chromosome 11: CM020728.1
chromosome 12: CM020729.1 g16 194
chromosome 1: CM007596.1
chromosome 2: CM007597.1
chromosome 3: CM007598.1
chromosome 4: CM007599.1
chromosome 5: CM007600.1
chromosome 6: CM007601.1
chromosome 7: CM007602.1
chromosome 8: CM007603.1
chromosome 9: CM007604.1
chromosome 10: CM007605.1
chromosome 11: CM007606.1
chromosome 12: CM007607.1 g17 206
chromosome 1: CM003897.1
chromosome 2: CM003898.1
chromosome 3: CM003899.1
chromosome 4: CM003900.1
chromosome 5: CM003901.1
chromosome 6: CM003902.1
chromosome 7: CM003903.1
chromosome 8: CM003904.1
chromosome 9: CM003905.1
chromosome 10: CM003906.1
chromosome 11: CM003907.1
chromosome 12: CM003908.1 g18 218
chromosome 1: CM003871.1
chromosome 2: CM003872.1
chromosome 3: CM003873.1
chromosome 4: CM003874.1
chromosome 5: CM003875.1
chromosome 6: CM003876.1
chromosome 7: CM003877.1
chromosome 8: CM003878.1
chromosome 9: CM003879.1
chromosome 10: CM003880.1
chromosome 11: CM003881.1
chromosome 12: CM003882.1 g19 230
chromosome 1: CM003885.1
chromosome 2: CM003886.1
chromosome 3: CM003887.1
chromosome 4: CM003888.1
chromosome 5: CM003889.1
chromosome 6: CM003890.1
chromosome 7: CM003891.1
chromosome 8: CM003892.1
chromosome 9: CM003893.1
chromosome 10: CM003894.1
chromosome 11: CM003895.1
chromosome 12: CM003896.1 g20 242
chromosome 1: CM000126.1
chromosome 2: CM000127.1
chromosome 3: CM000128.1
chromosome 4: CM000129.1
chromosome 5: CM000130.1
chromosome 6: CM000131.1
chromosome 7: CM000132.1
chromosome 8: CM000133.1
chromosome 9: CM000134.1
chromosome 10: CM000135.2
chromosome 11: CM000136.1
chromosome 12: CM000137.1 g21 254
chromosome 1: NC_029256.1
chromosome 2: NC_029257.1
chromosome 3: NC_029258.1
chromosome 4: NC_029259.1
chromosome 5: NC_029260.1
chromosome 6: NC_029261.1
chromosome 7: NC_029262.1
chromosome 8: NC_029263.1
chromosome 9: NC_029264.1
chromosome 10: NC_029265.1
chromosome 11: NC_029266.1
chromosome 12: NC_029267.1
chromosome 1: CM020633.1
chromosome 2: CM020634.1
chromosome 3: CM020635.1
chromosome 4: CM020636.1
chromosome 5: CM020637.1
chromosome 6: CM020638.1
chromosome 7: CM020639.1
chromosome 8: CM020640.1
chromosome 9: CM020641.1
chromosome 10: CM020642.1
chromosome 11: CM020643.1
chromosome 12: CM020644.1 g21 278
chromosome 1: CM012041.1
chromosome 2: CM012042.1
chromosome 3: CM012043.1
chromosome 4: CM012044.1
chromosome 5: CM012045.1
chromosome 6: CM012046.1
chromosome 7: CM012047.1
chromosome 8: CM012048.1
chromosome 9: CM012049.1
chromosome 10: CM012050.1
chromosome 11: CM012051.1
chromosome 12: CM012052.1 g22 290
chromosome 1: AP008207.2
chromosome 2: AP008208.2
chromosome 3: AP008209.2
chromosome 4: AP008210.2
chromosome 5: AP008211.2
chromosome 6: AP008212.2
chromosome 7: AP008213.2
chromosome 8: AP008214.2
chromosome 9: AP008215.2
chromosome 10: AP008216.2
chromosome 11: AP008217.2
chromosome 12: AP008218.2 g23 302
chromosome 1: CM020521.1
chromosome 2: CM020522.1
chromosome 3: CM020523.1
chromosome 4: CM020524.1
chromosome 5: CM020525.1
chromosome 6: CM020526.1
chromosome 7: CM020527.1
chromosome 8: CM020528.1
chromosome 9: CM020529.1
chromosome 10: CM020530.1
chromosome 11: CM020531.1
chromosome 12: CM020532.1 g24 314
chromosome 1: CM003076.1
chromosome 2: CM003077.1
chromosome 3: CM003078.1
chromosome 1: CM003064.1
chromosome 2: CM003065.1
chromosome 3: CM003066.1
chromosome 4: CM003067.1
chromosome 5: CM003068.1
chromosome 6: CM003069.1
chromosome 7: CM003070.1
chromosome 8: CM003071.1
chromosome 9: CM003072.1
chromosome 10: CM003073.1
chromosome 11: CM003074.1
chromosome 12: CM003075.1 g25 329
chromosome 1: CM000138.1
chromosome 2: CM000139.1
chromosome 3: CM000140.1
chromosome 4: CM000141.1
chromosome 5: CM000142.1
chromosome 6: CM000143.1
chromosome 7: CM000144.1
chromosome 8: CM000145.1
chromosome 9: CM000146.1
chromosome 10: CM000147.1
chromosome 11: CM000148.1
chromosome 12: CM000149.1 g26 341
chromosome 1: DG000053.1
chromosome 2: DG000054.1
chromosome 3: DG000055.1
chromosome 4: DG000056.1
chromosome 5: DG000057.1
chromosome 6: DG000058.1
chromosome 7: DG000059.1
chromosome 8: DG000060.1
chromosome 9: DG000061.1
chromosome 10: DG000062.1
chromosome 11: DG000063.1
chromosome 12: DG000064.1 g27 353
chromosome 1: DG000025.1
chromosome 2: DG000026.1
chromosome 3: DG000027.1
chromosome 4: DG000028.1
chromosome 5: DG000029.1
chromosome 6: DG000030.1
chromosome 7: DG000031.1
chromosome 8: DG000032.1
chromosome 9: DG000033.1
chromosome 10: DG000034.1
chromosome 11: DG000035.1
chromosome 12: DG000036.1 g28 365
chromosome 1: BA000010.8
chromosome 1: CM020694.1
chromosome 2: CM020695.1
chromosome 3: CM020696.1
chromosome 4: CM020697.1
chromosome 5: CM020698.1
chromosome 6: CM020699.1
chromosome 7: CM020700.1
chromosome 8: CM020701.1
chromosome 9: CM020702.1
chromosome 10: CM020703.1
chromosome 11: CM020704.1
chromosome 12: CM020705.1 g29 366
chromosome 1: CM020730.1
chromosome 2: CM020731.1
chromosome 3: CM020732.1
chromosome 4: CM020733.1
chromosome 5: CM020734.1
chromosome 6: CM020735.1
chromosome 7: CM020736.1
chromosome 8: CM020737.1
chromosome 9: CM020738.1
chromosome 10: CM020739.1
chromosome 11: CM020740.1
chromosome 12: CM020741.1 g30 390
chromosome 1: CM007627.2
chromosome 2: CM007628.2
chromosome 3: CM007629.2
chromosome 4: CM007630.2
chromosome 5: CM007631.2
chromosome 6: CM007632.2
chromosome 7: CM007633.2
chromosome 8: CM007634.2
chromosome 9: CM007635.2
chromosome 10: CM007636.2
chromosome 11: CM007637.2
chromosome 12: CM007638.2 g31 402
chromosome 1: CM020706.1
chromosome 2: CM020707.1
chromosome 3: CM020708.1
chromosome 4: CM020709.1
chromosome 5: CM020710.1
chromosome 6: CM020711.1
chromosome 7: CM020712.1
chromosome 8: CM020713.1
chromosome 9: CM020714.1
chromosome 10: CM020715.1
chromosome 11: CM020716.1
chromosome 12: CM020717.1 g32 414
chromosome 1: CM020742.1
chromosome 2: CM020743.1
chromosome 3: CM020744.1
chromosome 4: CM020745.1
chromosome 5: CM020746.1
chromosome 6: CM020747.1
chromosome 7: CM020748.1
chromosome 8: CM020749.1
chromosome 9: CM020750.1
chromosome 10: CM020751.1
chromosome 11: CM020752.1
chromosome 12: CM020753.1 g33 426
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