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|中文名称|英文名称|三字母符号|单字母符号|
丙氨酸 Alanine A Ala
苯丙氨酸 Phenylalanine F Phe
半胱氨酸 Cysteine C Cys
硒半胱氨酸* Selenocysteine U Sec
天冬氨酸 Aspartic acid / Aspartate D Asp
天冬酰胺 Asparagine N Asn
谷氨酸 Glutamic acid / Glutamate E Glu
谷氨酰胺 Glutamine Q Gln
甘氨酸 Glycine G Gly
组氨酸 Histidine H His
亮氨酸 Leucine L Leu
异亮氨酸 Isoleucine I Ile
赖氨酸 Lysine K Lys
吡咯赖氨酸* Pyrrolysine O Pyl
蛋氨酸 Methionine M Met
脯氨酸 Proline P Pro
精氨酸 Arginine R Arg
丝氨酸 Serine S Ser
苏氨酸 Threonine T Thr
缬氨酸 Valine V Val
色氨酸 Tryptophan W Trp
酪氨酸 Tyrosine Y Tyr
https://zh.wikipedia.org/wiki/%E6%A8%99%E6%BA%96%E8%9B%8B%E7%99%BD%E8%83%BA%E5%9F%BA%E9%85%B8%E5%88%97%E8%A1%A8
https://molbiol-tools.ca/Amino_acid_abbreviations.htm
http://web.sonoma.edu/users/t/thatcher/biol480/amino.htm
https://www.ics.uci.edu/~dock/pdb2pqr/programmerguide.html
https://www.ics.uci.edu/~dock/pdb2pqr/programmerguide.html
Terminal Naming Additions
N* : N-Terminal Residue (i.e. NALA, NLEU)
NEUTRAL-N* : Neutral N-Terminal Residue
C* : C-Terminal Residue (i.e. CLYS, CTYR)
NEUTRAL-C* : Neutral C-Terminal Residue
*5 : 5-Terminus for Nucleic Acids (i.e. DA5)
*3 : 3-Terminus for Nucleic Acids (i.e. DA3)
Amino Acid Residue Additions (see dat/PATCHES.xml)
ASH : Neutral ASP
CYX : SS-bonded CYS
CYM : Negative CYS
GLH : Neutral GLU
HIP : Positive HIS
HID : Neutral HIS, proton HD1 present
HIE : Neutral HIS, proton HE2 present
LYN : Neutral LYS
TYM : Negative TYR
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