||
废弃警告:
Warning messages: 1: package ‘BiocInstaller’ was built under R version 3.5.1 2: 'BiocInstaller' and 'biocLite()' are deprecated, use the 'BiocManager' CRAN package instead. 3: 'biocLite' is deprecated. Use 'BiocManager::install' instead. See help("Deprecated")
source("https://bioconductor.org/biocLite.R") options(BioC_mirror="http://mirrors.ustc.edu.cn/bioc/") biocLite("BiocUpgrade") biocLite("phyloseq")
上面是以前的安装方式,已经被废弃,现在推荐使用新的安装方式安装:
install.packages("BiocManager") BiocManager::install("phyloseq")
理简单了,不用记之前的命令和网址了,统一到CRAN,好事!
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