||
题记: “一切错误,皆有原因”。成熟的商业软件如VASP背后都有完备的理论体系做支撑,出现计算结果与实验或文献值不符的情况,一般应从参数的设置及结果数据的提取等方面找原因,不要轻易怀疑软件有bug。
1. 画焓差图时能量的选择
(1) H=E+PV,画焓差图时应选择H,不能选择E,如下面OUTCAR中红色标注部分所示
vi OUTCAR
………
FREE ENERGIE OF THE ION-ELECTRON SYSTEM(eV)
---------------------------------------------------
free energy TOTEN = -3.52331080 eV (E)
energy without entropy= -3.52291615 energy(sigma->0) = -3.52317925
enthalpy is TOTEN = 35.79101554 eV (H) P V= 39.31432634
dForce = 0.0000000E+00[ 0.000E+00, 0.000E+00] d Energy = 0.9492035E-05-0.949E-05
dForce = 0.0000000E+00[ 0.000E+00, 0.000E+00] d Ewald = 0.1695458E+00-0.170E+00
.....
(2)脚本如下-改自wh,注意焓一定要选择“enthalpy is TOTEN”
#!/bin/sh
rm -f pv_et.txt
for F in 0 10 50 100 150 200 225 230 240 250 265 280 300 350 400 450 500 800 1000 1200 1500 1800 2000 2500 3000 3500 4000 4500 4750 5000 5250 5500 6000
do
cd $F
for file in OUTCAR_*
do
pre=$(awk '/external pressure/{ print $4+$9 }' $file |tail -n 1)
vol=$(awk '/volume of cell/{print $5}' $file |tail -n 1)
et=$(awk '/enthalpy is TOTEN/{print $5}' $file |tail -n 1)
echo $pre \ \ $vol \ \ $et >> ../vv_et.txt
done
cd ../
done
cat vv_et.txt|sort -n -k 1 >pv_et.txt
rm vv_et.txt
a=$(awk '{print NR}' pv_et.txt)
echo $a
exit
(3)原脚本is Nice for extracting enthalpy, don't modify any parameters if you don't know what it means.
#!/bin/sh
### wh.2007-11-26 ###
rm -f p_en.txt
for file in OUTCAR_*
do
pre=$(awk '/external pressure/{ print $4+$9 }' $file |tail -n 1)
ent=$(awk '$3=="TOTEN"{print $5}' $file |tail -n 1)
echo $pre $ent \ \ $file >> pp_en.txt
done
cat pp_en.txt|sort -n -k 1 > p_en.txt
rm pp_en.txt
a=$(awk '{print NR}' p_en.txt)
echo $a
exit
2. VASP各能量项的含义 (待补充)
1) 以下为Yanchao Wang 文章摘录
As is known that Gibbs free energy reduces to H = U + PVat 0 K,(G=H+TS, H=U+PV) where U, Pand V are the static energy, pressure and volume per formula unit,respectively.
The high pressure competition between U and PVdominate the phase transitions. Although, the first order transi-tions of Pbca→I-42d→P21 have rather small 1.8% and 1.9%volume drops, respectively, these volume reductions are critical to initiate the phase transitions.
It is calculated thatalthough P21structure is 0.59 eV per H2O unit higher in U than I-42d structure at 17 Mbar, its PV term is 0.62 eV lower owing to the volumereduction associated with a higher packing efficiency.
Energetically, the tuning effect of PV termwith respect to static energy U is substan-tial in light of volumereduction preferable for denser structural packing.
3. 赝势文件中各参数的含义 (待补充)
PAW_PBE H 15Jun2001
1.00000000000000000
parameters from PSCTR are:
VRHFIN =H: ultrasoft test
LEXCH = PE
EATOM = 12.4884 eV, .9179 Ry
TITEL = PAW_PBE H 15Jun2001
LULTRA = F use ultrasoft PP ?
IUNSCR = 0 unscreen: 0-lin 1-nonlin 2-no
RPACOR = .000 partial core radius
POMASS = 1.000; ZVAL = 1.000 mass and valenz
RCORE = 1.100 outmost cutoff radius
RWIGS = .700; RWIGS = .370 wigner-seitz radius (au A)
ENMAX = 250.000; ENMIN = 200.000 eV
RCLOC = .701 cutoff for local pot
LCOR = T correct aug charges
LPAW = T paw PP
EAUG = 400.000
RMAX = 2.174 core radius for proj-oper
RAUG = 1.200 factor for augmentation sphere
RDEP = 1.112 radius for radial grids
QCUT = -5.749; QGAM = 11.498 optimization parameters
Description
l E TYP RCUT TYP RCUT
0 .000 23 1.100
0 .500 23 1.100
1 -.300 23 1.100
Error from kinetic energy argument (eV)
NDATA = 100
STEP = 20.000 1.050
5.77 5.50 5.37 5.11 4.99 4.75 4.52 4.40
4.19 3.98 3.88 3.68 3.49 3.31 3.14 2.98
2.83 2.68 2.54 2.35 2.22 2.11 1.94 1.84
1.74 1.61 1.48 1.40 1.29 1.19 1.09 1.01
.925 .851 .782 .719 .642 .590 .526 .482
.430 .382 .339 .301 .267 .236 .209 .178
.157 .133 .113 .988E-01 .832E-01 .697E-01 .562E-01 .467E-01
.386E-01 .305E-01 .239E-01 .186E-01 .143E-01 .109E-01 .820E-02 .580E-02
.425E-02 .291E-02 .195E-02 .130E-02 .808E-03 .544E-03 .368E-03 .278E-03
.239E-03 .227E-03 .225E-03 .224E-03 .218E-03 .204E-03 .181E-03 .156E-03
.127E-03 .983E-04 .735E-04 .520E-04 .369E-04 .274E-04 .225E-04 .204E-04
.201E-04 .200E-04 .193E-04 .178E-04 .151E-04 .121E-04 .914E-05 .676E-05
.512E-05 .437E-05 .412E-05 .410E-05
END of PSCTR-controll parameters
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