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Plant Cell:毛果杨NAC转录因子PtRD26的内含子滞留影响叶片衰老

已有 2311 次阅读 2021-2-11 08:45 |个人分类:每日摘要|系统分类:论文交流

An Alternative Splicing Variant of PtRD26 Delays Leaf Senescence by Regulating Multiple NAC Transcription Factors in Populus

第一作者Hou-Ling Wang

第一单位北京林业大学

通讯作者Zhonghai Li


 Abstract 


背景回顾During leaf senescence, the final stage of leaf development, nutrients are recycled from leaves to other organs, and therefore proper control of senescence is thus critical for plant fitness. 


提出问题:Although substantial progress has been achieved in understanding leaf senescence in annual plants, the molecular factors that control leaf senescence in perennial woody plants are largely unknown.


主要研究:Using RNA sequencing, we obtained a high-resolution temporal profile of gene expression during autumn leaf senescence in poplar (Populus tomentosa).


结果1-基因共表达网络:Identification of hub transcription factors (TFs) by co-expression network analysis of genes revealed that senescence-associated NAC-family TFs (Sen-NAC TFs) regulate autumn leaf senescence.


结果2-PtRD26内含子滞留:Age-dependent alternative splicing (AS) caused an intron-retention (IR) event in the pre-mRNA encoding PtRD26, a NAC-TF. This produced a truncated protein PtRD26IR, which functions as a dominant-negative regulator of senescence by interacting with multiple hub Sen-NAC TFs, thereby repressing their DNA-binding activities.


结果3-剪切因子鉴定:Functional analysis of senescence-associated splicing factors identified two U2 auxiliary factors that are involved in AS of PtRD26IR.


结果4-剪切因子验证Correspondingly, silencing of these factors decreased PtRD26IR transcript abundance and induced early senescence.


结论:We propose that an age-dependent increase of IR splice variants derived from Sen-NAC TFs is a regulatory program to fine tune the molecular mechanisms that regulate leaf senescence in trees.


 摘 要 


在叶片发育的最后阶段,即叶片衰老过程中,营养物质会被转运到其它器官中得以循环利用,因此正确调控叶片衰老对于植物的适应能力至关重要。尽管目前对于一年生植物的衰老研究已经十分深入了,但是控制多年生木本植物的叶片衰老机制还不清楚。本文中,作者通过RNA测序技术获得了毛果杨秋季叶片衰老的高分辨率时间转录图谱数据。通过共表达网络分析,作者发现衰老相关的NAC家族转录因子调控秋季叶片衰老。年龄依赖性的可变剪切导致一个NAC转录因子PtRD26的前体mRNA发生了内含子滞留事件。从而,形成了一个截短的PtRD26IR蛋白,该蛋白通过与多个衰老相关的NAC转录因子互作,抑制这些转录因子的DNA结合能力,从而发挥一个显性负调控的作用。对于衰老相关的剪切因子分析显示,两个U2辅助因子参与了PtRD26IR的可变剪切。因而,沉默掉这两个U2辅助因子能够降低PtRD26IR的转录本丰度,并且诱导提前衰老。因此,作者提出一个年龄依赖性的衰老相关NAC转录因子内含子滞留的增加是精细调节树木叶片衰老分子机制的调控程序。


 通讯作者 

**李中海**


个人简介:

1996-2000年,聊城师范学院,学士;

2000-2003年,中科院动物研究所,硕士;

2008-2012年,北京大学,博士。


研究方向:植物叶片衰老调控机制。


doi: https://doi.org/10.1093/plcell/koab046


Journal: Plant Cell

Published date: Feb 06, 2021



https://blog.sciencenet.cn/blog-3158122-1271690.html

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