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用ASReml运行多点试验多性状的因子模型

已有 2215 次阅读 2019-10-7 09:32 |个人分类:ASReml|系统分类:科研笔记

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                本文链接:https://blog.csdn.net/yzhlinscau/article/details/102239222
                            
      在VSNI官方论坛 link上,有人咨询能否运行多点试验多性状的因子模型?
问题是:多点试验多性状的因子模型,需要每个性状得到各自的因子模型结果。
答案是:可以运行。
疑问是:这种模型是否有意义?


简单示例如下:

run9<-asreml(cbind(yield,hh1)~trait+trait:Loc,
                    random=~at(trait):us(trait):fa(Loc,1):Genotype,
                    residual=~units:us(trait),  maxit=10,data=MET)


运行结果如下:

Var(run9)
at(trait, yield):trait:fa(Loc, 1):Genotype!trait_yield:yield         26.511314673
at(trait, yield):trait:fa(Loc, 1):Genotype!trait_hh1:yield          4.139143529
at(trait, yield):trait:fa(Loc, 1):Genotype!trait_hh1:hh1           6.208715293
at(trait, yield):trait:fa(Loc, 1):Genotype!1!var               0.000000000
at(trait, yield):trait:fa(Loc, 1):Genotype!2!var               0.087426566
at(trait, yield):trait:fa(Loc, 1):Genotype!3!var               0.090362905
at(trait, yield):trait:fa(Loc, 1):Genotype!4!var               0.261599691
at(trait, yield):trait:fa(Loc, 1):Genotype!5!var               0.000001600
at(trait, yield):trait:fa(Loc, 1):Genotype!6!var               0.000001600
at(trait, yield):trait:fa(Loc, 1):Genotype!1!fa1               0.407585698
at(trait, yield):trait:fa(Loc, 1):Genotype!2!fa1               0.394941929
at(trait, yield):trait:fa(Loc, 1):Genotype!3!fa1               0.255072194
at(trait, yield):trait:fa(Loc, 1):Genotype!4!fa1               0.375419515
at(trait, yield):trait:fa(Loc, 1):Genotype!5!fa1               0.301101708
at(trait, yield):trait:fa(Loc, 1):Genotype!6!fa1               0.104013083
at(trait, hh1):trait:fa(Loc, 1):Genotype!trait_yield:yield          6.208715293
at(trait, hh1):trait:fa(Loc, 1):Genotype!trait_hh1:yield           4.139143529
at(trait, hh1):trait:fa(Loc, 1):Genotype!trait_hh1:hh1            0.948916905
at(trait, hh1):trait:fa(Loc, 1):Genotype!1!var                7.445363318
at(trait, hh1):trait:fa(Loc, 1):Genotype!2!var                0.002515794
at(trait, hh1):trait:fa(Loc, 1):Genotype!3!var                 0.000000000
at(trait, hh1):trait:fa(Loc, 1):Genotype!4!var                 0.000000000
at(trait, hh1):trait:fa(Loc, 1):Genotype!5!var                 0.000001600
at(trait, hh1):trait:fa(Loc, 1):Genotype!6!var                 2.976343939
at(trait, hh1):trait:fa(Loc, 1):Genotype!1!fa1                -0.793744164
at(trait, hh1):trait:fa(Loc, 1):Genotype!2!fa1                 3.816775300
at(trait, hh1):trait:fa(Loc, 1):Genotype!3!fa1                 1.643122019
at(trait, hh1):trait:fa(Loc, 1):Genotype!4!fa1                -1.157603387
at(trait, hh1):trait:fa(Loc, 1):Genotype!5!fa1                 0.002461397
at(trait, hh1):trait:fa(Loc, 1):Genotype!6!fa1                 0.240477558




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