# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz In this paper we propose a statistical hypothesis test which tells whether two phylogenetic trees are significantly incongruent to each other by comparing t ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz Estimating differences between phylogenetic trees is one of the fundamental questions in computational biology. Conflicting phylogenies arise when, for exampl ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz Phylogenetic Inference: UPGMA, neighbour joining, bio-nj and fast ME methods of phylogenetic reconstruction are all implemented in the package ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz According to evolutionary theory, all organisms evolve from a single common ancestor. Phylogenetic trees provide an elegant way to depict hypothesized ancestor–descend ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz Summary: phangorn is a package for phylogenetic reconstruction and analysis in the R language. Previously it was only possible to estimate phylogenetic trees with distance met ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz POLYTOMIES AND STRICT CONSENSUS TREES: The two cladograms below illustrate a common situation in phylogenetic analysis, when two or more competing fully res ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz A gene is a unit of hereditary information. Except in some viruses, genes are made up of DNA, a complex molecule that codes genetic information for the trans ...
# 编者信息 熊荣川 明湖实验室 xiongrongchuan@126.com http://blog.sciencenet.cn/u/Bearjazz Polytomies can represent two different cases. First, they can represent the literal hypothesis that a common ancestral population split through cladogenes ...