科学网

 找回密码
  注册
搜索
热搜: 科学 论文
搜索
分享 [转载]Rosetta Commons 3.2 released
袁曙光 2011-2-4 21:41
Download http://www.rosettacommons.org/software/ Forum : http://www.rosettacommons.org/forum New features of the current release (Rosetta 3.2) Comparative Modeling: This application build structural models of proteins using one or more known structures as templates for mode ...
个人分类: 科研笔记|3826 次阅读|没有评论
分享 Mendeley, a FREE across plantform reference manager
袁曙光 2011-2-2 04:48
Mendeley, a FREE across plantform reference manager
Download http://www.mendeley.com/ platform: Linux, Windows, MacOs, iPhone General Cross-platform Mendeley Desktop has full support for Windows, Mac, and Linux. Secure backup Any documents synced in the desktop client will be backed up on the web. Mobil ...
3507 次阅读|没有评论
分享 homology modelling of GPCR with modeller
热度 1 袁曙光 2011-1-29 17:06
homology modelling of GPCR  with modeller
R ecent work on GPCR homology modelling found that the modelling of GPCR is different from these cytoplasm protein owing to the low sequence identity with its homology patenters. Model building by Modeller usually lead to satisfied models based on the protocol provided from Modeller ...
个人分类: 科研笔记|3252 次阅读|1 个评论 热度 1
分享 Reinstall Grub in SUSE
袁曙光 2011-1-14 18:05
When bi-system was installed in one computer,especially both windows andLlinux, we may reinstall one of them. The Grub of Linux would be destroyed when the windows system is update and it would be necessary to reinstall Grub in this case, otherwise we have to reinstall the whole Linux OS. Comma ...
个人分类: Linux相关|3049 次阅读|没有评论
分享 Protein-Protein Docking in Rosetta
热度 2 袁曙光 2010-12-26 11:08
The protein-protein docking workflow in Rosetta could be described as following: 1. Low resolution docking command: docking_protocol.linuxgccrelease @flags docking.log This step will create large number of initial pose e.g. 10,000 for full sampling. To faste ...
个人分类: 科研笔记|4348 次阅读|1 个评论 热度 2
分享 [转载]Gaussian03在linux下的安装和使用 ZZ
袁曙光 2010-10-29 03:37
先说一下,我安装的环境suse企业版9.0(sp1)64位,cpu个数是4个,内存5G,硬盘空间是110G. 在官网上说Gaussian03默认是支持的linux是suse9.0。其实大多数的linux的内核都是一样的,只不过是名字不同而已。 我从网上下载的版本是g03e01-em6 ...
个人分类: 好文转载|3238 次阅读|没有评论
分享 monomer, dimer or tetramer?
袁曙光 2010-10-27 23:12
Dimerand tetramer are often found in crystal structures and this sometimes confuses many people owing to the crystal symmetry in which the smallest subunit of a protein displays. Different structrual biologists have different habits: someone will display the whole mutime ...
个人分类: 科研笔记|3807 次阅读|没有评论
分享 [转载]KM, Kcat, Kcat/KM in Enzyme study
袁曙光 2010-10-14 20:42
k cat and K M k cat and K M are terms helpful in the description of an enzyme that follows the Michaelis-Menten kinetics. k cat is a constant that describes the turnover rate of an enzyme-substrate complex to product and enzyme ...
个人分类: Linux相关|10597 次阅读|2 个评论
分享 [转载]RMSD vs RMSF
袁曙光 2010-9-16 15:56
Root mean square deviation (bioinformatics) From Wikipedia, the free encyclopedia Jump to: navigation , search The root mean square deviation ( RMSD ) is the measure of the average distance between th ...
个人分类: 好文转载|11229 次阅读|没有评论
分享 Foldit, a structure biology scientific game
热度 1 袁曙光 2010-8-28 15:16
As you may know, the newest Fold-it update includes support for Lua Scripting . In very basic terms, Lua is a simple programming language that we can use to manipulate proteins and automate repetitive tasks -- much like we already do with the Cookbook. A script is actually quite similar ...
个人分类: Linux相关|4599 次阅读|1 个评论 热度 1

Archiver|手机版|科学网 ( 京ICP备14006957 )

GMT+8, 2019-8-20 21:48

Powered by ScienceNet.cn

Copyright © 2007- 中国科学报社

返回顶部