||| |
AutoCirc从RNA-seq数据中自动鉴定潜在circRNA的反向剪接位点。核心算法是C++实现的,用Perl包装,在相同计算环境下,比其他circRNA检测算法更快。AutoCirc用来检测基因组已知的所有物种中的circRNAs。它不需要基因注释,但是基因注释会改善circRNAs的检测。
下载:https://github.com/chanzhou/AutoCirc
语言:C++/Perl
时间:20170829
参考:Genome-Wide Maps of m6A circRNAs Identify Widespread and Cell-Type-Specific Methylation Patterns that Are Distinct from mRNAs
Archiver|手机版|科学网 ( 京ICP备07017567号-12 )
GMT+8, 2024-4-26 09:03
Powered by ScienceNet.cn
Copyright © 2007- 中国科学报社